Aliases hsa_circ_0020397 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:128768965-128926028:+
CircRNA type . Gene ID ENSG00000150760.8;ENSG00000232935.2;ENSG00000223528.3
Gene Name DOCK1;RP11-223P11.2;RP11-223P11.3 Detection pipeline .
Sample Type Nhek; Hmec; Hepg2; Helas3; H1hesc; Ag04450; Sknshra; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_909 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:128768965-128926028
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_T6;NHEK;Liver_N11;HUVEC;Liver_T12;Temporal;H1;Liver_N14;Liver_T14;Liver_N6;Lung;Diencephalon;Thyroid;Stomach;AG04450;Heart;Liver_T11;Liver_T17;Liver_N22;Liver_T19;Liver_T22
Method for Estimation Ribo-;poly(A)-
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circRNA_100722 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:128768965-128926028:+
CircRNA type exonic Gene ID ENSG00000150760.8;ENSG00000232935.2;ENSG00000223528.3
Gene Name DOCK1;RP11-223P11.2;RP11-223P11.3 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circ_0020397 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:128768965-128926028:+
CircRNA type N/A Gene ID ENSG00000150760.8;ENSG00000232935.2;ENSG00000223528.3
Gene Name DOCK1;RP11-223P11.2;RP11-223P11.3 Detection pipeline N/A
Sample Type Colorectal cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GACCGTGAACCGAACCGTCATTTC
Reverse Primer TCATCCGCTCCTC TGGCATCATAG
Pubmed 28707774
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
230 AAACTTCTCCGGACCGTGAA CAGAGGAATGCTTTGCCCAG 50 55 59.246 59.184 140 369 20 20
106 CGAACCGTCATTTCCATGGG ATGTGCACAGTGTCTCCGAT 55 50 59.267 59.39 161 266 20 20
107 GAACCGAACCGTCATTTCCA TGCACAGTGTCTCCGATCTG 50 55 58.485 59.755 157 263 20 20
160 CTGGTGTTGGTGTTCATTGGT CGCTCCTCTGGCATCATAGT 47.619 55 58.969 59.322 69 228 21 20
176 TGTTTCTCTGGTGTTGGTGT AAGTTCATCCGCTCCTCTGG 45 55 57.201 59.461 62 237 20 20
103 GTCATTTCCATGGGACGAGA AAGATGTGCACAGTGTCTCC 50 50 57.309 57.824 167 269 20 20
100 TGGGACGAGATTCTGAACTCA TGTTTCTAAGATGTGCACAGTGT 47.619 39.13 58.475 58.549 177 276 21 23
226 TCCATGGGACGAGATTCTGA GGAAGCATGACTGTCTTATGTGT 50 43.478 57.841 58.743 173 398 20 23
123 GCACGTCCAGATTATCATGGAG AGAAAGTTCATCCGCTCCTC 50 50 58.937 57.318 118 240 22 20
112 ACGTCCAGATTATCATGGAGAAA ATCCGCTCCTCTGGCATC 39.13 61.111 57.386 58.854 120 231 23 18
160 CTGGTGTTGGTGTTCATTGGT CGCTCCTCTGGCATCATAGT 47.619 55 58.969 59.322 69 228 21 20
106 CGAACCGTCATTTCCATGGG ATGTGCACAGTGTCTCCGAT 55 50 59.267 59.39 161 266 20 20
230 AAACTTCTCCGGACCGTGAA CAGAGGAATGCTTTGCCCAG 50 55 59.246 59.184 140 369 20 20
176 TGTTTCTCTGGTGTTGGTGT AAGTTCATCCGCTCCTCTGG 45 55 57.201 59.461 62 237 20 20
107 GAACCGAACCGTCATTTCCA TGCACAGTGTCTCCGATCTG 50 55 58.485 59.755 157 263 20 20
123 GCACGTCCAGATTATCATGGAG AGAAAGTTCATCCGCTCCTC 50 50 58.937 57.318 118 240 22 20
226 TCCATGGGACGAGATTCTGA GGAAGCATGACTGTCTTATGTGT 50 43.478 57.841 58.743 173 398 20 23
103 GTCATTTCCATGGGACGAGA AAGATGTGCACAGTGTCTCC 50 50 57.309 57.824 167 269 20 20
100 TGGGACGAGATTCTGAACTCA TGTTTCTAAGATGTGCACAGTGT 47.619 39.13 58.475 58.549 177 276 21 23
112 ACGTCCAGATTATCATGGAGAAA ATCCGCTCCTCTGGCATC 39.13 61.111 57.386 58.854 120 231 23 18
106 CGAACCGTCATTTCCATGGG ATGTGCACAGTGTCTCCGAT 55 50 59.267 59.39 161 266 20 20
230 AAACTTCTCCGGACCGTGAA CAGAGGAATGCTTTGCCCAG 50 55 59.246 59.184 140 369 20 20
107 GAACCGAACCGTCATTTCCA TGCACAGTGTCTCCGATCTG 50 55 58.485 59.755 157 263 20 20
160 CTGGTGTTGGTGTTCATTGGT CGCTCCTCTGGCATCATAGT 47.619 55 58.969 59.322 69 228 21 20
176 TGTTTCTCTGGTGTTGGTGT AAGTTCATCCGCTCCTCTGG 45 55 57.201 59.461 62 237 20 20
103 GTCATTTCCATGGGACGAGA AAGATGTGCACAGTGTCTCC 50 50 57.309 57.824 167 269 20 20
123 GCACGTCCAGATTATCATGGAG AGAAAGTTCATCCGCTCCTC 50 50 58.937 57.318 118 240 22 20
226 TCCATGGGACGAGATTCTGA GGAAGCATGACTGTCTTATGTGT 50 43.478 57.841 58.743 173 398 20 23
112 ACGTCCAGATTATCATGGAGAAA ATCCGCTCCTCTGGCATC 39.13 61.111 57.386 58.854 120 231 23 18
100 TGGGACGAGATTCTGAACTCA TGTTTCTAAGATGTGCACAGTGT 47.619 39.13 58.475 58.549 177 276 21 23
230 AAACTTCTCCGGACCGTGAA CAGAGGAATGCTTTGCCCAG 50 55 59.246 59.184 140 369 20 20
107 GAACCGAACCGTCATTTCCA TGCACAGTGTCTCCGATCTG 50 55 58.485 59.755 157 263 20 20
106 CGAACCGTCATTTCCATGGG ATGTGCACAGTGTCTCCGAT 55 50 59.267 59.39 161 266 20 20
160 CTGGTGTTGGTGTTCATTGGT CGCTCCTCTGGCATCATAGT 47.619 55 58.969 59.322 69 228 21 20
176 TGTTTCTCTGGTGTTGGTGT AAGTTCATCCGCTCCTCTGG 45 55 57.201 59.461 62 237 20 20
103 GTCATTTCCATGGGACGAGA AAGATGTGCACAGTGTCTCC 50 50 57.309 57.824 167 269 20 20
123 GCACGTCCAGATTATCATGGAG AGAAAGTTCATCCGCTCCTC 50 50 58.937 57.318 118 240 22 20
226 TCCATGGGACGAGATTCTGA GGAAGCATGACTGTCTTATGTGT 50 43.478 57.841 58.743 173 398 20 23
112 ACGTCCAGATTATCATGGAGAAA ATCCGCTCCTCTGGCATC 39.13 61.111 57.386 58.854 120 231 23 18
100 TGGGACGAGATTCTGAACTCA TGTTTCTAAGATGTGCACAGTGT 47.619 39.13 58.475 58.549 177 276 21 23