Aliases hsa_circ_0002343 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:235643369-235658138:-
CircRNA type . Gene ID ENSG00000168243.10
Gene Name GNG4 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; Nhek; K562; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_30727 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:235643369-235658138
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Cortex;H1;H9;Liver_N6;Liver_T11;GM12878;SH-SY5Y_D2_exp1;Liver_T15;HeLa_S3;HepG2;BJ;AG04450;SH-SY5Y_D0_exp1;Liver_T3;Liver_T12;Liver_N15;Liver_T6;Liver_T7;PA1;Forebrain;Temporal;Occipital;Liver_T13;Parietal;Liver_T14;Liver;NHEK;A549;Liver_N11;Liver_N12;K562;Hs68;Liver_T22;Liver_N20;Liver_N21;Liver_T19
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circRNA_100494 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:235643369-235658138:-
CircRNA type exonic Gene ID ENSG00000168243.10
Gene Name GNG4 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circ_0002343 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:235643369-235658138:n/a
CircRNA type n/a Gene ID NA
Gene Name NA Detection pipeline n/a
Sample Type cervical carcinoma
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 28080204
Aliases hsa_circ_0002343 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:235643369-235658138:-
CircRNA type N/A Gene ID ENSG00000168243.10
Gene Name GNG4 Detection pipeline N/A
Sample Type Cervical carcinoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GTGGTGTGCAGGTGAACAAG
Reverse Primer ACAACACGCCAACTACCACA
Pubmed 28080204
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
163 GGGAACAATTCAGCCAGGTC CGTGTTGTCAGCTCGCAATA 55 50 58.823 58.932 182 344 20 20
100 agACAGTCTTCTCCATGGGG TTCTGAGTTGTTGCCTTGCC 55 50 58.422 58.968 145 244 20 20
167 TCAGCCAGGTCAGAACTCTT ATGTGGTAGTTGGCGTGTTG 50 50 58.278 58.765 191 357 20 20
300 agcatgctaccctagtttcct AGAAGCACCTGGATGAGACA 47.619 50 58.518 58.351 2 301 21 20
169 ACAATTCAGCCAGGTCAGAAC TGGTAGTTGGCGTGTTGTCA 47.619 50 58.491 59.822 186 354 21 20
204 tgctaccctagtttcctcatct AGAGTTCTGACCTGGCTGAA 45.455 50 58.004 58.278 6 209 22 20
224 ggcacagagtaacagcaataga TGTTGTCAGCTCGCAATAACC 45.455 47.619 58.138 59.196 119 342 22 21
120 tggcacagagtaacagcaat TTGTTGCCTTGCCTGGTTTA 45 45 57.433 58.218 118 237 20 20
106 TCAGCCAGGTCAGAACTCTTATT CACCTGGATGAGACATTTGCT 43.478 47.619 59.159 58.28 191 296 23 21
107 GCCAGGTCAGAACTCTTATTTCA GAAGCACCTGGATGAGACATTT 43.478 45.455 58.42 58.649 194 300 23 22
163 GGGAAAATAGGACTTGAGATGGG ACCATGAACTTCGAAACGTGA 47.826 42.857 58.535 58.171 162 324 23 21
116 CATGGGGAAAATAGGACTTGAGA AGCATCCCACATTAAGTCAACG 43.478 45.455 57.884 58.99 158 273 23 22
346 GAATTGTTCCACGGGCTTGT ATGTGGTAGTTGGCGTGTTG 50 50 59.041 58.765 12 357 20 20
273 GAAGCGAGCAATGAAGAGGG CGTGTTGTCAGCTCGCAATA 55 50 58.987 58.932 72 344 20 20
180 GAGGACTGAAGCGAGCAATG TTCTGAGTTGTTGCCTTGCC 55 50 58.995 58.968 65 244 20 20
277 GGCTTGTACCACAGCTTGTT AGAAGCACCTGGATGAGACA 50 50 58.681 58.351 25 301 20 20
299 CACAGCTTGGAGGACTGAAG TGGTAGTTGGCGTGTTGTCA 55 50 58.194 59.822 56 354 20 20
199 CTTGTTCACCTGCACACCAC TTGTTGCCTTGCCTGGTTTA 55 45 59.618 58.218 39 237 20 20
311 TGTACCACAGCTTGTTCACC TGTCAGCTCGCAATAACCATG 50 47.619 58.038 58.991 29 339 20 21
272 GGGCCTCCTACAAATTGGGA ATGATGTGGTAGTTGGCGTG 55 50 59.371 58.262 89 360 20 20
307 CAGCTTGTTCACCTGCACAC TGTTGTCAGCTCGCAATAACC 55 47.619 59.97 59.196 36 342 20 21
166 GACTGAAGCGAGCAATGAAGA TGCCTTGCCTGGTTTATTGA 47.619 45 58.659 57.699 68 233 21 20
208 CCACAGCTTGTTCACCTGC GAGTTGTTGCCTTGCCTGG 57.895 57.895 59.344 59.338 33 240 19 19
219 AGCAATGAAGAGGGCCTCC CACCTGGATGAGACATTTGCT 57.895 47.619 59.388 58.28 78 296 19 21
321 TTGTTCCACGGGCTTGTACC AGCTCGCAATAACCATGAACT 55 42.857 60.536 58.009 15 335 20 21
212 TTGGAGGACTGAAGCGAGC AGCATCCCACATTAAGTCAACG 57.895 45.455 59.707 58.99 62 273 19 22
227 CGGGCTTGTACCACAGCTT AGGTTTTCTGAGTTGTTGCCT 57.895 42.857 60.303 57.982 23 249 19 21
266 TGGTAAGATGAATTGTTCCACGG CCCACATTAAGTCAACGGTAGG 43.478 50 58.993 58.733 3 268 23 22
277 GGCTTGTACCACAGCTTGTT AGAAGCACCTGGATGAGACA 50 50 58.681 58.351 25 301 20 20
273 GAAGCGAGCAATGAAGAGGG CGTGTTGTCAGCTCGCAATA 55 50 58.987 58.932 72 344 20 20
346 GAATTGTTCCACGGGCTTGT ATGTGGTAGTTGGCGTGTTG 50 50 59.041 58.765 12 357 20 20
199 CTTGTTCACCTGCACACCAC TTGTTGCCTTGCCTGGTTTA 55 45 59.618 58.218 39 237 20 20
272 GGGCCTCCTACAAATTGGGA ATGATGTGGTAGTTGGCGTG 55 50 59.371 58.262 89 360 20 20
180 GAGGACTGAAGCGAGCAATG TTCTGAGTTGTTGCCTTGCC 55 50 58.995 58.968 65 244 20 20
307 CAGCTTGTTCACCTGCACAC TGTTGTCAGCTCGCAATAACC 55 47.619 59.97 59.196 36 342 20 21
311 TGTACCACAGCTTGTTCACC TGTCAGCTCGCAATAACCATG 50 47.619 58.038 58.991 29 339 20 21
299 CACAGCTTGGAGGACTGAAG TGGTAGTTGGCGTGTTGTCA 55 50 58.194 59.822 56 354 20 20
219 AGCAATGAAGAGGGCCTCC CACCTGGATGAGACATTTGCT 57.895 47.619 59.388 58.28 78 296 19 21
208 CCACAGCTTGTTCACCTGC GAGTTGTTGCCTTGCCTGG 57.895 57.895 59.344 59.338 33 240 19 19
166 GACTGAAGCGAGCAATGAAGA TGCCTTGCCTGGTTTATTGA 47.619 45 58.659 57.699 68 233 21 20
321 TTGTTCCACGGGCTTGTACC AGCTCGCAATAACCATGAACT 55 42.857 60.536 58.009 15 335 20 21
227 CGGGCTTGTACCACAGCTT AGGTTTTCTGAGTTGTTGCCT 57.895 42.857 60.303 57.982 23 249 19 21
212 TTGGAGGACTGAAGCGAGC AGCATCCCACATTAAGTCAACG 57.895 45.455 59.707 58.99 62 273 19 22
266 TGGTAAGATGAATTGTTCCACGG CCCACATTAAGTCAACGGTAGG 43.478 50 58.993 58.733 3 268 23 22
346 GAATTGTTCCACGGGCTTGT ATGTGGTAGTTGGCGTGTTG 50 50 59.041 58.765 12 357 20 20
277 GGCTTGTACCACAGCTTGTT AGAAGCACCTGGATGAGACA 50 50 58.681 58.351 25 301 20 20
272 GGGCCTCCTACAAATTGGGA ATGATGTGGTAGTTGGCGTG 55 50 59.371 58.262 89 360 20 20
273 GAAGCGAGCAATGAAGAGGG CGTGTTGTCAGCTCGCAATA 55 50 58.987 58.932 72 344 20 20
180 GAGGACTGAAGCGAGCAATG TTCTGAGTTGTTGCCTTGCC 55 50 58.995 58.968 65 244 20 20
199 CTTGTTCACCTGCACACCAC TTGTTGCCTTGCCTGGTTTA 55 45 59.618 58.218 39 237 20 20
299 CACAGCTTGGAGGACTGAAG TGGTAGTTGGCGTGTTGTCA 55 50 58.194 59.822 56 354 20 20
307 CAGCTTGTTCACCTGCACAC TGTTGTCAGCTCGCAATAACC 55 47.619 59.97 59.196 36 342 20 21
311 TGTACCACAGCTTGTTCACC TGTCAGCTCGCAATAACCATG 50 47.619 58.038 58.991 29 339 20 21
166 GACTGAAGCGAGCAATGAAGA TGCCTTGCCTGGTTTATTGA 47.619 45 58.659 57.699 68 233 21 20
208 CCACAGCTTGTTCACCTGC GAGTTGTTGCCTTGCCTGG 57.895 57.895 59.344 59.338 33 240 19 19
219 AGCAATGAAGAGGGCCTCC CACCTGGATGAGACATTTGCT 57.895 47.619 59.388 58.28 78 296 19 21
321 TTGTTCCACGGGCTTGTACC AGCTCGCAATAACCATGAACT 55 42.857 60.536 58.009 15 335 20 21
266 TGGTAAGATGAATTGTTCCACGG CCCACATTAAGTCAACGGTAGG 43.478 50 58.993 58.733 3 268 23 22
212 TTGGAGGACTGAAGCGAGC AGCATCCCACATTAAGTCAACG 57.895 45.455 59.707 58.99 62 273 19 22
227 CGGGCTTGTACCACAGCTT AGGTTTTCTGAGTTGTTGCCT 57.895 42.857 60.303 57.982 23 249 19 21