Aliases hsa_circ_0011946 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:41578954-41618413:-
CircRNA type . Gene ID ENSG00000010803.12
Gene Name SCMH1 Detection pipeline .
Sample Type A549; Sknshra; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_31884 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:41578954-41618413
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Parietal;Liver_T11;A549;Liver;Temporal;Occipital;Liver_N7;Heart;Hs68;Liver_T20;Liver_N22;Liver_N17;Liver_T18;Liver_N18
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circ_0011946 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:41578954-41618413:-
CircRNA type N/A Gene ID ENSG00000010803.12
Gene Name SCMH1 Detection pipeline N/A
Sample Type breast cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GCTGGTGTTCCTTGACTGGA
Reverse Primer CACTGTAGCAAACCAGCATTTCT
Pubmed 29593432
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
233 CTCGCCACCCATCAAAAGTG TGCTGGTTTGCTACAGTGTT 55 45 59.477 57.949 99 331 20 20
211 TGGCTGGGCAAATGAAATGA TGCTGCTCCACTACAGAGG 45 57.895 58.358 58.719 153 363 20 19
274 TGCAGGTTGTCTCCAGTCAA GACCTTCCCTGCTCCATCAT 50 55 59.163 59.157 17 290 20 20
117 CAATAGTGGCTGGGCAAATGA CCTCTAGGTGGGTATTAGGGG 47.619 57.143 58.898 58.096 147 263 21 21
167 GCACCAGTAGTCAAAGGCC GGGGAGACTGGTAATTGGTTT 57.895 47.619 58.444 57.549 79 245 19 21
181 CTGGGCAAATGAAATGAGGGT AGAAATGCTGGTTTGCTACAGT 47.619 40.909 58.818 58.51 156 336 21 22
228 CCAGTAGTCAAAGGCCCCTC AGCTTGTGAGATTCTCTGGGA 60 47.619 59.747 58.455 82 309 20 21
165 CTCTGAGCCCCGAACCTC GGACCTTCCCTGCTCCAT 66.667 61.111 59.104 58.253 127 291 18 18
226 TGACAAGCACCTCTGAGCC ACTTCAAGAAATGCTGGTTTGC 57.895 40.909 59.627 58.279 117 342 19 22
171 CCCGAACCTCCCCAATAGTG TGTGAGATTCTCTGGGACCT 60 50 59.82 57.369 135 305 20 20
174 GGGCAAATGAAATGAGGGTTCT TGCTGGTTTGCTACAGTGTTTTA 45.455 39.13 59.166 59.052 158 331 22 23
232 CCCTCGCCACCCATCAAAA TGGTTTGCTACAGTGTTTTAGCT 57.895 39.13 60.304 58.796 97 328 19 23
253 TCGAAGCGGCACCAGTAG TGCTACAGTGTTTTAGCTTGTGA 61.111 39.13 59.428 58.553 71 323 18 23
274 TGCAGGTTGTCTCCAGTCAA GACCTTCCCTGCTCCATCAT 50 55 59.163 59.157 17 290 20 20
228 CCAGTAGTCAAAGGCCCCTC AGCTTGTGAGATTCTCTGGGA 60 47.619 59.747 58.455 82 309 20 21
233 CTCGCCACCCATCAAAAGTG TGCTGGTTTGCTACAGTGTT 55 45 59.477 57.949 99 331 20 20
211 TGGCTGGGCAAATGAAATGA TGCTGCTCCACTACAGAGG 45 57.895 58.358 58.719 153 363 20 19
171 CCCGAACCTCCCCAATAGTG TGTGAGATTCTCTGGGACCT 60 50 59.82 57.369 135 305 20 20
167 GCACCAGTAGTCAAAGGCC GGGGAGACTGGTAATTGGTTT 57.895 47.619 58.444 57.549 79 245 19 21
117 CAATAGTGGCTGGGCAAATGA CCTCTAGGTGGGTATTAGGGG 47.619 57.143 58.898 58.096 147 263 21 21
181 CTGGGCAAATGAAATGAGGGT AGAAATGCTGGTTTGCTACAGT 47.619 40.909 58.818 58.51 156 336 21 22
226 TGACAAGCACCTCTGAGCC ACTTCAAGAAATGCTGGTTTGC 57.895 40.909 59.627 58.279 117 342 19 22
174 GGGCAAATGAAATGAGGGTTCT TGCTGGTTTGCTACAGTGTTTTA 45.455 39.13 59.166 59.052 158 331 22 23
165 CTCTGAGCCCCGAACCTC GGACCTTCCCTGCTCCAT 66.667 61.111 59.104 58.253 127 291 18 18
253 TCGAAGCGGCACCAGTAG TGCTACAGTGTTTTAGCTTGTGA 61.111 39.13 59.428 58.553 71 323 18 23
232 CCCTCGCCACCCATCAAAA TGGTTTGCTACAGTGTTTTAGCT 57.895 39.13 60.304 58.796 97 328 19 23