Aliases hsa_circ_0002968 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:49609654-49618211:+
CircRNA type . Gene ID ENSG00000187714.6
Gene Name SLC18A3 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; Nhek; K562; Huvec; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases HSA_CIRCpedia_1733 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:49609654-49618211
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_N14;Stomach;Liver_N3;Cerebellum;Temporal;Liver_T3;SH-SY5Y_D4_exp1;Liver_T14;SH-SY5Y_D2_exp1;NHEK;Liver_N6;Diencephalon;SH-SY5Y_D0_exp1;PA1;GM12878;Liver_N8;Thyroid;Lung;Liver_N15;SH-SY5Y_D8_exp2;Parietal;Liver_T6;Occipital;Liver_N7;SH-SY5Y_D0_exp2;Liver_T7;SH-SY5Y_D4_exp2;K562;HUVEC;Forebrain;Kidney;Cortex;Liver_T10;Liver_N10;Liver_N12;Liver_N13;BJ;Heart;HeLa_S3;H9;Liver_T13;Liver_T12;AG04450;Liver_N11;Liver;Liver_T8;H1;A549;Liver_T11;Hs68;Liver_N17;Liver_T20;Liver_N22;Liver_T22;Liver_N20;Liver_T18;Liver_T21;Liver_N19;Liver_T19;Liver_N18;Liver_T17
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases circ_008777 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:49609654-49618211:+
CircRNA type n/a Gene ID ENSG00000187714.6
Gene Name SLC18A3 Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circRNA_100589 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:49609654-49618211:+
CircRNA type exonic Gene ID ENSG00000187714.6
Gene Name SLC18A3 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circ_0002968 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:49609654-49618211:+
CircRNA type N/A Gene ID ENSG00000187714.6
Gene Name SLC18A3 Detection pipeline N/A
Sample Type Gliomas
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GGAGCTCATGGATGCAAATC
Reverse Primer TTGTTGTCACGCTTGCTTCT
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
240 GCTGCTGGACACTTTAGCTG TTCTGCTCATGATGGCAAGC 55 50 59.199 58.899 19 258 20 20
120 GCTGTGTGGAATCAAGCACC TGTTGTCACGCTTGCTTCTG 55 50 59.758 59.343 154 273 20 20
127 AGATGCTGTGTGGAATCAAGC AATTGTTGTCACGCTTGCTT 47.619 40 58.91 57.131 150 276 21 20
140 TGGAGCTCATGGATGCAAATC TTCACCAAGAAGCCGATGAA 47.619 45 58.696 57.44 72 211 21 20
173 GTGTGGAATCAAGCACCTTCA CTGATATCGTTTCAGGACTGTGA 47.619 43.478 58.77 58.001 157 329 21 23
124 TTCATCGGCTTCTTGGTGAA GGACTGTGAATGTAGAATCTCCA 45 43.478 57.44 57.655 192 315 20 23
119 CTTTGCCAAGTGATTCAGATGG TCACCAAGAAGCCGATGAATAA 45.455 40.909 57.894 57.785 92 210 22 22
185 CTGGACACTTTAGCTGTTCTCT CCAAGAAGCCGATGAATAATTCC 45.455 43.478 57.736 57.886 23 207 22 23
120 GCTGTGTGGAATCAAGCACC TGTTGTCACGCTTGCTTCTG 55 50 59.758 59.343 154 273 20 20
140 TGGAGCTCATGGATGCAAATC TTCACCAAGAAGCCGATGAA 47.619 45 58.696 57.44 72 211 21 20
240 GCTGCTGGACACTTTAGCTG TTCTGCTCATGATGGCAAGC 55 50 59.199 58.899 19 258 20 20
127 AGATGCTGTGTGGAATCAAGC AATTGTTGTCACGCTTGCTT 47.619 40 58.91 57.131 150 276 21 20
124 TTCATCGGCTTCTTGGTGAA GGACTGTGAATGTAGAATCTCCA 45 43.478 57.44 57.655 192 315 20 23
173 GTGTGGAATCAAGCACCTTCA CTGATATCGTTTCAGGACTGTGA 47.619 43.478 58.77 58.001 157 329 21 23
119 CTTTGCCAAGTGATTCAGATGG TCACCAAGAAGCCGATGAATAA 45.455 40.909 57.894 57.785 92 210 22 22
185 CTGGACACTTTAGCTGTTCTCT CCAAGAAGCCGATGAATAATTCC 45.455 43.478 57.736 57.886 23 207 22 23
240 GCTGCTGGACACTTTAGCTG TTCTGCTCATGATGGCAAGC 55 50 59.199 58.899 19 258 20 20
120 GCTGTGTGGAATCAAGCACC TGTTGTCACGCTTGCTTCTG 55 50 59.758 59.343 154 273 20 20
140 TGGAGCTCATGGATGCAAATC TTCACCAAGAAGCCGATGAA 47.619 45 58.696 57.44 72 211 21 20
173 GTGTGGAATCAAGCACCTTCA CTGATATCGTTTCAGGACTGTGA 47.619 43.478 58.77 58.001 157 329 21 23
127 AGATGCTGTGTGGAATCAAGC AATTGTTGTCACGCTTGCTT 47.619 40 58.91 57.131 150 276 21 20
124 TTCATCGGCTTCTTGGTGAA GGACTGTGAATGTAGAATCTCCA 45 43.478 57.44 57.655 192 315 20 23
119 CTTTGCCAAGTGATTCAGATGG TCACCAAGAAGCCGATGAATAA 45.455 40.909 57.894 57.785 92 210 22 22
185 CTGGACACTTTAGCTGTTCTCT CCAAGAAGCCGATGAATAATTCC 45.455 43.478 57.736 57.886 23 207 22 23
240 GCTGCTGGACACTTTAGCTG TTCTGCTCATGATGGCAAGC 55 50 59.199 58.899 19 258 20 20
120 GCTGTGTGGAATCAAGCACC TGTTGTCACGCTTGCTTCTG 55 50 59.758 59.343 154 273 20 20
140 TGGAGCTCATGGATGCAAATC TTCACCAAGAAGCCGATGAA 47.619 45 58.696 57.44 72 211 21 20
127 AGATGCTGTGTGGAATCAAGC AATTGTTGTCACGCTTGCTT 47.619 40 58.91 57.131 150 276 21 20
173 GTGTGGAATCAAGCACCTTCA CTGATATCGTTTCAGGACTGTGA 47.619 43.478 58.77 58.001 157 329 21 23
124 TTCATCGGCTTCTTGGTGAA GGACTGTGAATGTAGAATCTCCA 45 43.478 57.44 57.655 192 315 20 23
119 CTTTGCCAAGTGATTCAGATGG TCACCAAGAAGCCGATGAATAA 45.455 40.909 57.894 57.785 92 210 22 22
185 CTGGACACTTTAGCTGTTCTCT CCAAGAAGCCGATGAATAATTCC 45.455 43.478 57.736 57.886 23 207 22 23