Aliases chr11:40159197-40151022 Scientific name Solanum tuberosum
Organism Potato Genome Locus chr11:40151022-40159197:-
CircRNA type exon Gene ID n/a
Gene Name PGSC0003DMG402007403 Detection pipeline CIRI
Sample Type Stem tissues subjected to Brasiliense Infection
Method for Estimation Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer TTTCGTGCAGCGTCTCATCA
Reverse Primer ATCATTCTTCACCTGATCTAGGGC
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
169 CATTTCCTTCTCCTCGCTGC CCAGATTTGAAGGCACGGAG 55 55 58.987 58.91 49 217 20 20
156 CTGCCCACACAAGGAATCAA CTCCCAGATTTGAAGGCACG 50 55 58.38 58.91 65 220 20 20
194 TCTGATGATGAGACGCTCCG AGTTCTTGTACTTGCGGCAA 55 45 59.335 58.038 183 376 20 20
126 ATGATGGAAGGAGCGCTTTC TCCGCTCCCAGATTTGAAGG 50 55 58.327 59.747 99 224 20 20
163 TGCCCACACAAGGAATCAATTT ACATTCCGCTCCCAGATTTG 40.909 50 59.029 58.245 66 228 22 20
101 TCACTTTCACCCATCCACTTG CGGCGAAGATTTGATAAGCG 47.619 50 58.137 57.715 153 253 21 20
139 ACAAATATGATGGAAGGAGCGC TCTACATTCCGCTCCCAGAT 45.455 50 59.119 57.912 93 231 22 20
114 AGCTTTTCACTTTCACCCATCC GGCTATACGGCGAAGATTTGA 45.455 47.619 59.107 58.249 147 260 22 21
192 ACTTTCATTTCCTTCTCCTCGC CGTATCTACATTCCGCTCCC 45.455 55 58.661 57.651 44 235 22 20